Susanne Gerber
Contributing Principal Investigator
- Address: JGU & UMC, Anselm-Franz-von-Bentzel-Weg 3, 55128 Mainz
- Phone: +49 (0)6131 39 27331
- Since 2020: Adjunct Director, Institute of Molecular Biology (IMB) and Professor at iDNA
- 2015-2020: Assistant Professor for Bioinformatics at the Faculty of Biology, JGU, Mainz
- 2011-2015: Postdoc, Faculty of Informatics, Università della Svizzera italiana (USI), Lugano, Switzerland
Education:
- 2011: PhD in Biophysics at Humboldt University of Berlin
- 2007: M.Sc. in Bioinformatics, Free University of Berlin and Konrad Zuse Institute for Scientific Computing
- 2004: B.Sc. in Bioinformatics, Free University of Berlin and Max Planck Institute for Molecular Genetics
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Doria HB, Caliendo C, Gerber S, Pfenninger M (2021)
Photoperiod is an important seasonal selection factor in Chironomus riparius (Diptera: Chironomidae) Biological Journal of the Linnean Society, blab147 -
Ruffini N, Müller MB, Schmitt U, Gerber S (2021)
IntelliPy: a GUI for analyzing IntelliCage data Bioinformatics, 37(21):3972-3973 -
Formes H, Bernardes JP, Mann A, Bayer F, Pontarollo G, Kiouptsi K, Schäfer K, Attig S, Nikolova T, Hofmann T, Schattenberg J, Todorov H, Gerber S, Rosenstiel P, Bopp T, Sommer F and Reinhardt C (2021)
The gut microbiota instructs the hepatic endothelial cell transcriptome iScience, 103092 -
Pfenninger M, Reuss F, KIebler A, Schönnenbeck P, Caliendo C, Gerber S, Cocchiararo B, Reuter S, Blüthgen N, Mody K, Mishra B, Bálint M, Thines M and Feldmeyer B (2021)
Genomic basis for drought resistance in European beech forests threatened by climate change eLife, 10 -
Schüle M, Butto T, Dewi S, Schlichtholz L, Strand S, Gerber S, Endres K, Schweiger S and Winter J (2021)
mTOR Driven Gene Transcription Is Required for Cholesterol Production in Neurons of the Developing Cerebral Cortex International Journal of Molecular Sciences, 22(11):6034 -
Chongtham MC, Butto T, Mungikar K, Gerber S and Winter J (2021)
INTACT vs. FANS for Cell-Type-Specific Nuclei Sorting: A Comprehensive Qualitative and Quantitative Comparison International Journal of Molecular Sciences, 22(10):5335 -
Navandar M, Martín-García E, Maldonado R, Lutz B, Gerber S and Ruiz de Azua I (2021)
Transcriptional signatures in prefrontal cortex confer vulnerability versus resilience to food and cocaine addiction-like behavior Scientific Reports, 11(1):9076 -
Cuadrado DP, Wierczeiko A, Hewel C, Gerber S and Lutz B (2021)
Dichotomic Hippocampal Transcriptome After Glutamatergic vs. GABAergic Deletion of the Cannabinoid CB1 Receptor Frontiers in Synaptic Neuroscience, 13:660718 -
Wierczeiko A, Gammel L, Radyushkin K, Nguyen VTT, Todorov H, Gerber S and Endres K (2021)
Voluntary Wheel Running Did Not Alter Gene Expression in 5xfad Mice, but in Wild-Type Animals Exclusively after One-Day of Physical Activity Cells, 10(3):693 -
Rodrigues DR, Everschor-Sitte K, Gerber S and Horenko I (2021)
A deeper look into natural sciences with physics-based and data-driven measures iScience, 24(3):102171 -
Weißbach S, Sys S, Hewel C, Todorov H, Schweiger S, Winter J, Pfenninger M, Torkamani A, Evans D, Burger J, Everschor-Sitte K,
May-Simera HL and Gerber S (2021)
Reliability of genomic variants across different next-generation sequencing platforms and bioinformatic processing pipelines BMC Genomics, 22(62) -
Ruffini N, Klingenberg S, Schweiger S and Gerber S (2020)
Common Factors in Neurodegeneration: A Meta-Study Revealing Shared Patterns on a Multi-Omics Scale. Cells, 9:2642 -
Kiouptsi K, Pontarollo G, Todorov H, Braun J, Jäckel S, Koeck T, Bayer F, Karwot C, Karpi A, Gerber S, Jansen Y, Wild P, Ruf W, Daiber A, Van Der Vorst E, Weber C, Döring Y and Reinhardt C (2020)
Germ-free housing conditions do not affect aortic root and aortic arch lesion size of late atherosclerotic low-density lipoprotein receptor-deficient mice Gut Microbes, 11:1809–1823 -
Todorov H, Searle-White E and Gerber S (2020)
Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial PLoS One, 15:e0230798 -
Fischer C, Endle H, Schumann L, Wilken-Schmitz A, Kaiser J, Gerber S, Vogelaar CF, Schmidt MHH, Nitsch R, Snodgrass I, Thomas D, Vogt J and Tegeder I (2020)
Prevention of age-associated neuronal hyperexcitability with improved learning and attention upon knockout or antagonism of LPAR2 Cell Mol Life Sci -
dos Santos Guilherme M, Todorov H, Osterhof C, Möllerke A, Cub K, Hankeln T, Gerber S and Endres K (2020)
Impact of Acute and Chronic Amyloid-β Peptide Exposure on Gut Microbial Commensals in the Mouse Front Microbiol -
Todorov H, Kollar B, Bayer F, Brandão I, Mann A, Mohr J, Pontarollo G, Formes H, Stauber R, Kittner JM, Endres K, Watzer B, Nockher WA, Sommer F, Gerber S and Reinhardt C (2020)
α-Linolenic Acid-Rich Diet Influences Microbiota Composition and Villus Morphology of the Mouse Small Intestine Nutrients, 12:732 -
Domingo-Rodriguez L, Ruiz de Azua I, Dominguez E, Senabre E, Serra I, Kummer S, Navandar M, Baddenhausen S, Hofmann C, Andero R, Gerber S, Navarrete M, Dierssen M, Lutz B, Martín-García E and Maldonado R (2020)
A specific prelimbic-nucleus accumbens pathway controls resilience versus vulnerability to food addiction Nat Commun, 11:782 -
Gerber S, Pospisil L, Navandar M and Horenko I (2020)
Low-cost scalable discretization, prediction, and feature selection for complex systems Sci Adv, 6:eaaw0961 -
Kiouptsi K, Jäckel S, Pontarollo G, Grill A, Kuijpers MJE, Wilms E, Weber C, Sommer F, Nagy M, Neideck C, Jansen Y, Ascher S, Formes H, Karwot C, Bayer F, Kollar B, Subramaniam S, Molitor M, Wenzel P, Rosenstiel P, Todorov H, Gerber S, Walter U, Jurk K, Heemskerk JWM, van der Vorst EPC, Döring Y and Reinhardt C (2019)
The Microbiota Promotes Arterial Thrombosis in Low-Density Lipoprotein Receptor-Deficient Mice MBio